STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX83813.1Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
AMX85274.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.969
AMX83812.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.962
AMX84539.1
Daunorubicin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.848
AMX84537.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.791
AMX84538.1
Daunorubicin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.666
AMX84644.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.541
AMX83811.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.540
AMX83814.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.516
AMX83809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.480
AMX83810.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.480
Your Current Organism:
Geobacillus subterraneus
NCBI taxonomy Id: 129338
Other names: AS 12673, DSM 13552, Geobacillus subterraneus Nazina et al. 2001 emend. Poli et al. 2013, KCTC 3922, VKM B-2226, strain 34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.