STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX84505.1Stage V sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)    
Predicted Functional Partners:
AMX84526.1
Protein prkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.988
AMX84525.1
Stress response protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.
 
  
 0.987
AMX84528.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.586
AMX84506.1
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
AMX83957.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.493
AMX85021.1
Spore coat protein GerQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.474
AMX84164.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.473
AMX83974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
AMX84276.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
AMX85104.1
Stage III sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.421
Your Current Organism:
Geobacillus subterraneus
NCBI taxonomy Id: 129338
Other names: AS 12673, DSM 13552, Geobacillus subterraneus Nazina et al. 2001 emend. Poli et al. 2013, KCTC 3922, VKM B-2226, strain 34
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.