STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311625_01257Unannotated protein. (126 aa)    
Predicted Functional Partners:
GCA_001311625_01256
Unannotated protein.
     0.988
GCA_001311625_03899
Unannotated protein.
   
 0.883
GCA_001311625_04048
Unannotated protein.
  
 0.839
GCA_001311625_04049
Unannotated protein.
  
 0.839
GCA_001311625_04050
Unannotated protein.
  
 0.839
GCA_001311625_01168
Unannotated protein.
   
 0.838
GCA_001311625_01169
Unannotated protein.
   
 0.838
GCA_001311625_01296
Unannotated protein.
  
 
 0.818
GCA_001311625_01295
Unannotated protein.
  
 
 0.817
GCA_001311625_06697
Unannotated protein.
  
 0.808
Your Current Organism:
Lysinibacillus parviboronicapiens
NCBI taxonomy Id: 1293591
Other names: L. parviboronicapiens JCM 18861, Lysinibacillus parviboronicapiens JCM 18861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.