STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311625_04532Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_001311625_04533
Unannotated protein.
 
     0.941
GCA_001311625_04534
Unannotated protein.
 
     0.869
GCA_001311625_07694
Unannotated protein.
 
  
 0.786
GCA_001311625_05975
Unannotated protein.
 
  
 0.781
GCA_001311625_04535
Unannotated protein.
       0.768
GCA_001311625_05977
Unannotated protein.
 
  
 0.763
GCA_001311625_05972
Unannotated protein.
 
  
 0.758
GCA_001311625_06541
Unannotated protein.
  
     0.754
GCA_001311625_07693
Unannotated protein.
 
  
 0.718
GCA_001311625_06544
Unannotated protein.
 
  
 0.687
Your Current Organism:
Lysinibacillus parviboronicapiens
NCBI taxonomy Id: 1293591
Other names: L. parviboronicapiens JCM 18861, Lysinibacillus parviboronicapiens JCM 18861
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.