STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311625_06310Unannotated protein. (49 aa)    
Predicted Functional Partners:
GCA_001311625_00471
Unannotated protein.
   
 
 0.905
GCA_001311625_06311
Unannotated protein.
  
  
 0.757
GCA_001311625_05193
Unannotated protein.
  
  
 0.742
GCA_001311625_06312
Unannotated protein.
  
  
 0.719
GCA_001311625_06303
Unannotated protein.
  
  
 0.715
GCA_001311625_00949
Unannotated protein.
  
    0.689
GCA_001311625_03650
Unannotated protein.
   
    0.647
GCA_001311625_03278
Unannotated protein.
   
    0.639
GCA_001311625_03652
Unannotated protein.
   
    0.639
GCA_001311625_03651
Unannotated protein.
   
    0.638
Your Current Organism:
Lysinibacillus parviboronicapiens
NCBI taxonomy Id: 1293591
Other names: L. parviboronicapiens JCM 18861, Lysinibacillus parviboronicapiens JCM 18861
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.