STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL03774.1Competence protein ComGA. (324 aa)    
Predicted Functional Partners:
KRL03773.1
Type II secretion system F domain protein.
 
 0.999
KRL03772.1
Hypothetical protein.
 
  
 0.975
KRL02062.1
Competence protein.
 
  
 0.868
KRK99791.1
Peptidoglycan-binding protein.
    
   0.803
KRK99368.1
Aggregation promoting factor-like surface protein.
    
   0.803
KRL03771.1
Hypothetical protein.
       0.741
KRL03770.1
Hypothetical protein.
       0.736
KRL02063.1
comEA protein.
 
  
 0.731
KRL03767.1
Site-specific dna-methyltransferase (adenine-specific).
       0.727
KRL03838.1
Helicase C-terminal domain protein.
   
  
 0.722
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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