STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL03786.1Hypothetical protein. (1095 aa)    
Predicted Functional Partners:
KRL00014.1
Hypothetical protein.
 
0.971
ribB
3,4-dihydroxy-2-butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
    
  0.888
KRL00420.1
Hypothetical protein.
 
 
 0.881
KRL00350.1
Sensory box ggdef family protein.
0.868
KRL00044.1
Hypothetical protein.
 
0.856
KRK99129.1
Hypothetical protein.
0.853
KRL03326.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.850
KRL00422.1
Hypothetical protein.
  
     0.775
KRL03787.1
Hypothetical protein.
       0.773
KRL01459.1
Hypothetical protein.
 
0.684
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.