Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KRL00376.1 | KRL02324.1 | FC20_GL001371 | FC20_GL000271 | Phosphatase, histone macroh2a1 family. | Recombination factor protein RarA. | 0.905 |
| KRL00376.1 | polA | FC20_GL001371 | FC20_GL000241 | Phosphatase, histone macroh2a1 family. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.444 |
| KRL00387.1 | KRL02324.1 | FC20_GL001360 | FC20_GL000271 | HAD family sugar phosphatase; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family. | Recombination factor protein RarA. | 0.685 |
| KRL02294.1 | KRL02324.1 | FC20_GL000325 | FC20_GL000271 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Recombination factor protein RarA. | 0.772 |
| KRL02294.1 | KRL03336.1 | FC20_GL000325 | FC20_GL001424 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | SNF2 family DNA RNA helicase. | 0.976 |
| KRL02294.1 | KRL03345.1 | FC20_GL000325 | FC20_GL001434 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Atp-dependent helicase recq. | 0.928 |
| KRL02294.1 | polA | FC20_GL000325 | FC20_GL000241 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.999 |
| KRL02324.1 | KRL00376.1 | FC20_GL000271 | FC20_GL001371 | Recombination factor protein RarA. | Phosphatase, histone macroh2a1 family. | 0.905 |
| KRL02324.1 | KRL00387.1 | FC20_GL000271 | FC20_GL001360 | Recombination factor protein RarA. | HAD family sugar phosphatase; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family. | 0.685 |
| KRL02324.1 | KRL02294.1 | FC20_GL000271 | FC20_GL000325 | Recombination factor protein RarA. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.772 |
| KRL02324.1 | KRL02325.1 | FC20_GL000271 | FC20_GL000272 | Recombination factor protein RarA. | Hypothetical protein. | 0.866 |
| KRL02324.1 | KRL03336.1 | FC20_GL000271 | FC20_GL001424 | Recombination factor protein RarA. | SNF2 family DNA RNA helicase. | 0.533 |
| KRL02324.1 | KRL03345.1 | FC20_GL000271 | FC20_GL001434 | Recombination factor protein RarA. | Atp-dependent helicase recq. | 0.859 |
| KRL02324.1 | KRL03848.1 | FC20_GL000271 | FC20_GL000113 | Recombination factor protein RarA. | Hypothetical protein; Belongs to the FtsK/SpoIIIE/SftA family. | 0.684 |
| KRL02324.1 | polA | FC20_GL000271 | FC20_GL000241 | Recombination factor protein RarA. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.696 |
| KRL02324.1 | rny | FC20_GL000271 | FC20_GL000106 | Recombination factor protein RarA. | Phosphodiesterase; Endoribonuclease that initiates mRNA decay. | 0.520 |
| KRL02324.1 | rpsD | FC20_GL000271 | FC20_GL000273 | Recombination factor protein RarA. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.659 |
| KRL02325.1 | KRL02324.1 | FC20_GL000272 | FC20_GL000271 | Hypothetical protein. | Recombination factor protein RarA. | 0.866 |
| KRL02325.1 | rpsD | FC20_GL000272 | FC20_GL000273 | Hypothetical protein. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.681 |
| KRL03336.1 | KRL02294.1 | FC20_GL001424 | FC20_GL000325 | SNF2 family DNA RNA helicase. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.976 |
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