STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL01891.1ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (368 aa)    
Predicted Functional Partners:
KRL00739.1
ABC superfamily ATP binding cassette transporter, membrane protein.
  
 0.999
KRL01889.1
Multiple sugar ABC transporter permease component.
 
  
  0.988
KRL01890.1
Maltose ABC transporter permease.
 
  
  0.982
KRL01888.1
ABC transporter, permease protein.
 
  
  0.920
KRL00983.1
ABC transporter, ATP-binding protein.
  
0.869
KRL03076.1
Abc transporter permease protein.
  
 0.858
KRL02935.1
Efflux ABC transporter, permease protein.
 
 0.858
KRL01892.1
Beta-phosphoglucomutase.
      0.815
KRL01893.1
Glycosyl transferase, family 65.
       0.769
KRL01894.1
Intracellular maltogenic amylase; Belongs to the glycosyl hydrolase 13 family.
 
     0.630
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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