STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL01055.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
KRL01054.1
ABC transporter ATP-binding membrane protein.
 
 
0.985
KRL01056.1
Hypothetical protein.
 
     0.826
KRL00780.1
Hypothetical protein.
 
  0.753
KRL02569.1
Cell division ATP-binding protein FtsE.
  
     0.669
KRL01885.1
Lipoprotein releasing system, ATP-binding protein.
  
     0.658
KRK99987.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
     0.657
KRL00781.1
Multidrug ABC transporter ATPase permease.
 
  0.644
KRL03083.1
Abc transporter, atp-binding protein.
  
  
  0.608
KRL00755.1
ABC superfamily ATP binding cassette transporter ABC protein.
  
  
  0.602
KRL02544.1
ABC multidrug transporter ATPase.
  
  
  0.532
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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