STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL00741.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
KRL00739.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.999
KRL00740.1
ABC superfamily ATP binding cassette transporter, ABC protein.
     0.990
KRL00983.1
ABC transporter, ATP-binding protein.
 
0.879
KRL02935.1
Efflux ABC transporter, permease protein.
  
 0.859
KRL03076.1
Abc transporter permease protein.
  
 0.858
KRL02306.1
Hypothetical protein.
   
 0.540
KRL03654.1
Glutamine abc superfamily atp binding cassette transporter, membrane protein.
   
 0.540
KRL03522.1
ABC transporter, permease protein.
   
 0.540
KRL03282.1
Lipoprotein.
  
 
 0.525
KRL03083.1
Abc transporter, atp-binding protein.
 
  
 0.486
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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