STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL00752.1Bacterial extracellular solute-binding protein, family 5. (424 aa)    
Predicted Functional Partners:
KRL00751.1
Bacterial extracellular solute-binding protein, family 5.
     0.943
KRL02834.1
Oligopeptide ABC transporter, permease.
 
 0.876
KRL02833.1
ABC transporter, permease protein.
 
 0.859
KRL02832.1
Oligopeptide abc superfamily atp binding cassette transporter, abc protein; Belongs to the ABC transporter superfamily.
 
 0.754
KRK99211.1
Oligopeptide binding protein.
 
     0.734
KRL02831.1
ABC-type oligopeptide transport system, ATPase.
 
 0.711
KRL00750.1
Hypothetical protein.
       0.533
KRL00673.1
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
  
  
 
0.512
KRL02835.1
Peptide ABC transporter substrate-binding protein.
  
  
 
0.462
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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