STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL00420.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
KRL00014.1
Hypothetical protein.
 
 
 0.996
KRK99129.1
Hypothetical protein.
 
 
 0.988
KRL00350.1
Sensory box ggdef family protein.
 
 
0.969
KRL00044.1
Hypothetical protein.
 
 
0.965
KRL01457.1
Signal transduction diguanylate cyclase.
 
 
 0.929
KRL03826.1
Hypothetical protein.
  
 
 0.925
KRL01459.1
Hypothetical protein.
 
  
 
0.908
KRL03786.1
Hypothetical protein.
 
 
 0.881
KRL00049.1
Cyclic diguanylate phosphodiesterase (EAL) domain protein.
 
 
 0.881
KRL03644.1
Hypothetical protein.
 
 
 0.880
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.