STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL00169.1Epss. (357 aa)    
Predicted Functional Partners:
KRL00639.1
Exopolysaccharide phosphotransferase cps2g.
 
  
 0.906
KRL00168.1
Hypothetical protein.
 
 
 0.876
KRL00170.1
Glycosyl transferase, group 1 family protein.
    
0.863
KRL02974.1
Accessory sec system glycosyltransferase gtfb.
   
 
 0.827
KRL02975.1
Accessory sec system glycosyltransferase gtfb.
   
 
 0.827
KRL01556.1
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.754
KRL00167.1
Hypothetical protein.
       0.746
KRL02014.1
Hydrolase of the alpha beta superfamily.
   
 
 0.731
KRL00690.1
Hypothetical protein.
   
 
 0.731
KRL00171.1
Hypothetical protein.
  
  
 0.593
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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