STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRL03258.1Muramidase (flagellum-specific). (396 aa)    
Predicted Functional Partners:
KRL03520.1
Hypothetical protein.
 
    
 0.793
KRL03259.1
N-acetylmuramoyl-l-alanine amidase.
 
   
0.690
KRL00214.1
Cell wall-associated hydrolase.
 
    
 0.654
KRL02213.1
Penicillin-binding protein.
  
  
  0.504
KRL03862.1
Adaptor protein; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
  
     0.437
KRL02953.1
Peptidase, M23 family.
 
  
 0.437
KRL00697.1
Hypothetical protein.
  
     0.429
KRL03257.1
Hypothetical protein.
       0.410
KRL03260.1
TrkA-C domain protein.
       0.408
Your Current Organism:
Lactobacillus equicursoris
NCBI taxonomy Id: 1293597
Other names: L. equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris CIP 110162, Lactobacillus equicursoris DI70, Lactobacillus equicursoris DSM 19284, Lactobacillus equicursoris DSM 19284 = JCM 14600 = CIP 110162, Lactobacillus equicursoris JCM 14600, Lactobacillus sp. DI70
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