STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO17152.1ABC superfamily ATP binding cassette transporter, binding protein. (347 aa)    
Predicted Functional Partners:
KRO17153.1
Carbohydrate ABC transporter.
 
 0.996
KRO17155.1
Carbohydrate uptake ABC superfamily, ATP binding cassette transporter, membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
KRO17154.1
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
KRO16204.1
Ribose ABC transporter ATPase.
  
  0.632
KRO17151.1
Phosphoglycerate mutase family protein; Belongs to the phosphoglycerate mutase family.
       0.512
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.464
Your Current Organism:
Lactobacillus saniviri
NCBI taxonomy Id: 1293598
Other names: L. saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri DSM 24301, Lactobacillus saniviri DSM 24301 = JCM 17471, Lactobacillus saniviri JCM 17471, Lactobacillus saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri YIT 12363, Lactobacillus sp. YIT 12363
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