STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO18422.1Lysr family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
KRO18423.1
Hypothetical protein.
       0.773
KRO18078.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.732
KRO18421.1
Hypothetical protein.
 
     0.699
KRO18420.1
Cupin domain protein.
 
  
 0.652
KRO18418.1
Short-chain dehydrogenase oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.615
KRO15460.1
Malolactic fermentation system transcription activator; Belongs to the LysR transcriptional regulatory family.
  
     0.601
KRO18419.1
4-carboxymuconolactone decarboxylase.
 
     0.578
KRO18424.1
Short-chain dehydrogenase oxidoreductase.
       0.554
Your Current Organism:
Lactobacillus saniviri
NCBI taxonomy Id: 1293598
Other names: L. saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri DSM 24301, Lactobacillus saniviri DSM 24301 = JCM 17471, Lactobacillus saniviri JCM 17471, Lactobacillus saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri YIT 12363, Lactobacillus sp. YIT 12363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.