STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO16285.1OmpR family DNA-binding response regulator. (231 aa)    
Predicted Functional Partners:
KRO16286.1
Two component sensor transduction histidine kinase.
 0.998
KRO18534.1
Sensor histidine kinase.
 0.960
KRO16695.1
Two component sensor transduction histidine kinase.
 0.941
KRO16756.1
Sensor histidine kinase.
 0.939
KRO15486.1
Two component sensor transduction histidine kinase.
 0.938
KRO16384.1
Signal transduction histidine kinase.
 0.896
KRO16553.1
Two component sensor transduction histidine kinase.
 0.852
KRO16287.1
yycH protein.
  
  
 0.834
KRO16288.1
Hypothetical protein.
  
  
 0.830
KRO16289.1
Beta-lactamase superfamily metal-dependent hydrolase.
  
  
 0.769
Your Current Organism:
Lactobacillus saniviri
NCBI taxonomy Id: 1293598
Other names: L. saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri DSM 24301, Lactobacillus saniviri DSM 24301 = JCM 17471, Lactobacillus saniviri JCM 17471, Lactobacillus saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri YIT 12363, Lactobacillus sp. YIT 12363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.