STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO16230.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
KRO16231.1
Type III restriction protein res subunit.
 
     0.949
KRO16227.1
Helicase.
 
     0.917
KRO16228.1
Hypothetical protein.
 
     0.907
KRO16045.1
Superfamily protein DNA and RNA helicase.
   
  0.873
KRO16229.1
Hypothetical protein.
       0.806
KRO16232.1
Hypothetical protein.
       0.783
KRO17337.1
Hypothetical protein.
 
     0.770
KRO16551.1
Hypothetical protein.
  
     0.665
KRO16162.1
Phage helicase.
 
     0.663
KRO15148.1
Hypothetical protein.
  
     0.642
Your Current Organism:
Lactobacillus saniviri
NCBI taxonomy Id: 1293598
Other names: L. saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri DSM 24301, Lactobacillus saniviri DSM 24301 = JCM 17471, Lactobacillus saniviri JCM 17471, Lactobacillus saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri YIT 12363, Lactobacillus sp. YIT 12363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.