STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO17994.1Metal-dependent hydrolase. (371 aa)    
Predicted Functional Partners:
KRO17995.1
Hypothetical protein.
     0.983
KRO17993.1
Selenocysteine synthase (seryl-tRNASer selenium transferase).
 
  
 0.971
KRO17996.1
Hypothetical protein.
 
     0.934
KRO17992.1
2-dehydro-3-deoxyphosphogluconate aldolase.
 
    0.932
KRO17998.1
Hypothetical protein.
 
     0.930
KRO17999.1
Transcriptional antiterminator.
 
     0.834
KRO17997.1
Hypothetical protein.
       0.719
Your Current Organism:
Lactobacillus saniviri
NCBI taxonomy Id: 1293598
Other names: L. saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri DSM 24301, Lactobacillus saniviri DSM 24301 = JCM 17471, Lactobacillus saniviri JCM 17471, Lactobacillus saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri YIT 12363, Lactobacillus sp. YIT 12363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.