STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO16164.1Phage nucleotide-binding protein. (252 aa)    
Predicted Functional Partners:
KRO16160.1
Primase.
 
     0.947
KRO16162.1
Phage helicase.
 
     0.938
KRO16163.1
Hypothetical protein.
 
     0.844
KRO16161.1
Single stranded binding protein.
       0.807
KRO16231.1
Type III restriction protein res subunit.
 
     0.623
KRO16190.1
Hypothetical protein.
 
    0.601
KRO15134.1
P4 family phage plasmid primase.
 
     0.541
KRO16187.1
Prophage protein.
 
     0.529
KRO15782.1
Prophage protein.
 
     0.521
KRO16728.1
Xre family DNA-binding protein.
  
     0.477
Your Current Organism:
Lactobacillus saniviri
NCBI taxonomy Id: 1293598
Other names: L. saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri DSM 24301, Lactobacillus saniviri DSM 24301 = JCM 17471, Lactobacillus saniviri JCM 17471, Lactobacillus saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri YIT 12363, Lactobacillus sp. YIT 12363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.