STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO15891.1Hypothetical protein. (209 aa)    
Predicted Functional Partners:
KRO16635.1
Phage major capsid protein.
   
   0.775
KRO15892.1
Hypothetical protein.
       0.766
KRO15893.1
Hypothetical protein.
       0.742
KRO15895.1
Hypothetical protein.
  
    0.735
KRO15896.1
Hypothetical protein.
       0.712
KRO15894.1
Hypothetical protein.
       0.710
KRO15897.1
Hypothetical protein.
       0.703
KRO15899.1
Hypothetical protein.
       0.701
KRO15898.1
Hypothetical protein.
       0.688
KRO15889.1
Phage portal protein, SPP1 Gp6-like.
  
    0.552
Your Current Organism:
Lactobacillus saniviri
NCBI taxonomy Id: 1293598
Other names: L. saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri DSM 24301, Lactobacillus saniviri DSM 24301 = JCM 17471, Lactobacillus saniviri JCM 17471, Lactobacillus saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri YIT 12363, Lactobacillus sp. YIT 12363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.