STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRO15604.1Transcriptional regulator. (215 aa)    
Predicted Functional Partners:
KRO15605.1
Multidrug ABC superfamily ATP binding cassette transporter, permease protein.
     0.984
KRO15606.1
Nodulation ATP-binding protein I family protein.
 
     0.941
KRO15607.1
Hypothetical protein.
       0.572
KRO15609.1
ABC transporter ATPase.
 
     0.539
KRO18301.1
Hypothetical protein.
  
     0.521
KRO15608.1
ABC transporter permease.
       0.475
KRO15610.1
Hypothetical protein.
       0.474
KRO15611.1
Hydrolase, had superfamily, cof family.
 
     0.427
Your Current Organism:
Lactobacillus saniviri
NCBI taxonomy Id: 1293598
Other names: L. saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri DSM 24301, Lactobacillus saniviri DSM 24301 = JCM 17471, Lactobacillus saniviri JCM 17471, Lactobacillus saniviri JCM 17471 = DSM 24301, Lactobacillus saniviri YIT 12363, Lactobacillus sp. YIT 12363
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.