STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311805_02789Unannotated protein. (190 aa)    
Predicted Functional Partners:
GCA_001311805_02788
Unannotated protein.
       0.628
GCA_001311805_02790
Unannotated protein.
  
  
 0.577
GCA_001311805_00806
Unannotated protein.
   
   0.572
GCA_001311805_02791
Unannotated protein.
  
  
 0.563
GCA_001311805_02884
Unannotated protein.
    
   0.506
GCA_001311805_02885
Unannotated protein.
    
   0.506
GCA_001311805_05038
Unannotated protein.
    
   0.491
Your Current Organism:
Lentibacillus juripiscarius
NCBI taxonomy Id: 1293599
Other names: L. juripiscarius JCM 12147, Lentibacillus juripiscarius IS40-3, Lentibacillus juripiscarius JCM 12147
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.