STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ48441.1Aminoacyl-histidine dipeptidase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)    
Predicted Functional Partners:
OSQ49244.1
Cytochrome c oxidase subunit II; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M17 family.
   
 
 0.879
pepA
Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.879
gshB
Glutathione synthetase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.
    
 0.875
pepN
Aminopeptidase N; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.859
OSQ46177.1
Gamma-glutamyltranspeptidase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.853
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.812
OSQ46638.1
Serine hydroxymethyltransferase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.812
OSQ50040.1
Gamma-glutamyltransferase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.810
OSQ49513.1
Gamma-glutamyltransferase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.810
OSQ45254.1
Gamma-glutamyltransferase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.810
Your Current Organism:
Thalassospira alkalitolerans
NCBI taxonomy Id: 1293890
Other names: CECT 8273, JCM 18968, T. alkalitolerans, Thalassospira alkalitolerans Tsubouchi et al. 2014, Thalassospira sp. MBE#61, strain MBE#61
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