STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ47900.1Stress responsive protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)    
Predicted Functional Partners:
OSQ48870.1
3-oxoadipate enol-lactonase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.452
polA
DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
    0.433
OSQ47901.1
Hemolysin secretion protein D; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.408
OSQ47902.1
Multidrug ABC transporter ATP-binding protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.408
OSQ47903.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.408
Your Current Organism:
Thalassospira alkalitolerans
NCBI taxonomy Id: 1293890
Other names: CECT 8273, JCM 18968, T. alkalitolerans, Thalassospira alkalitolerans Tsubouchi et al. 2014, Thalassospira sp. MBE#61, strain MBE#61
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