STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ42161.1Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology. (612 aa)    
Predicted Functional Partners:
OSQ49973.1
Cell division protein FtsK; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.907
OSQ50163.1
Thymidylate kinase; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.887
OSQ46251.1
TonB-dependent receptor; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.887
OSQ48473.1
Hemolysin expression modulating protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.814
OSQ41481.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    
0.695
OSQ47700.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.657
OSQ42530.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.648
OSQ47699.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.639
OSQ47502.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.633
OSQ44626.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.615
Your Current Organism:
Thalassospira alkalitolerans
NCBI taxonomy Id: 1293890
Other names: CECT 8273, JCM 18968, T. alkalitolerans, Thalassospira alkalitolerans Tsubouchi et al. 2014, Thalassospira sp. MBE#61, strain MBE#61
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