STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ41526.1Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)    
Predicted Functional Partners:
OSQ48396.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
OSQ48389.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.703
OSQ42667.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
OSQ45292.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.685
OSQ46942.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
 
  
 0.668
OSQ46820.1
Lantibiotic ABC transporter; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.662
OSQ49950.1
Molecular chaperone DnaJ; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
OSQ48452.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
guaB
Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.641
OSQ48796.1
Hypothetical protein; Bacteria available from JCM 18968. Source DNA available from JCM 18968; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
Your Current Organism:
Thalassospira alkalitolerans
NCBI taxonomy Id: 1293890
Other names: CECT 8273, JCM 18968, T. alkalitolerans, Thalassospira alkalitolerans Tsubouchi et al. 2014, Thalassospira sp. MBE#61, strain MBE#61
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