STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ35756.1LysR family transcriptional regulator; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
OSQ38443.1
Hypothetical protein; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.714
OSQ36561.1
Hypothetical protein; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.672
OSQ37402.1
Transcriptional regulator; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.658
OSQ36999.1
Hypothetical protein; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.645
OSQ37391.1
Hypothetical protein; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.644
OSQ38491.1
LysR family transcriptional regulator; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
   
 0.643
OSQ38243.1
LysR family transcriptional regulator; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.641
OSQ37019.1
Transcriptional regulator; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.631
OSQ36965.1
LysR family transcriptional regulator; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.589
OSQ37409.1
LysR family transcriptional regulator; Bacteria available from JCM 18969. Source DNA available from JCM 18969; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.566
Your Current Organism:
Thalassospira mesophila
NCBI taxonomy Id: 1293891
Other names: CECT 8274, JCM 18969, T. mesophila, Thalassospira mesophila Tsubouchi et al. 2014, Thalassospira sp. MBE#74, strain MBE#74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.