STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311825_01461Unannotated protein. (157 aa)    
Predicted Functional Partners:
GCA_001311825_01460
Unannotated protein.
     0.989
GCA_001311825_01579
Unannotated protein.
 
 0.976
GCA_001311825_02496
Unannotated protein.
 
 0.965
GCA_001311825_01709
Unannotated protein.
 
 0.948
GCA_001311825_02556
Unannotated protein.
  
 0.892
GCA_001311825_02238
Unannotated protein.
 
 0.889
GCA_001311825_01332
Unannotated protein.
 
 0.879
GCA_001311825_02991
Unannotated protein.
 
 0.875
GCA_001311825_01032
Unannotated protein.
 
 0.873
GCA_001311825_00234
Unannotated protein.
  
 0.872
Your Current Organism:
Desulfovibrio brasiliensis
NCBI taxonomy Id: 1294020
Other names: D. brasiliensis JCM 12178, Desulfovibrio brasiliensis JCM 12178
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.