STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311865_02727Unannotated protein. (72 aa)    
Predicted Functional Partners:
GCA_001311865_03909
Unannotated protein.
  
 0.748
GCA_001311865_03910
Unannotated protein.
  
 0.748
GCA_001311865_03911
Unannotated protein.
  
 0.748
GCA_001311865_02726
Unannotated protein.
       0.746
GCA_001311865_03186
Unannotated protein.
  
 0.594
GCA_001311865_03187
Unannotated protein.
  
 0.594
GCA_001311865_02714
Unannotated protein.
    
  0.554
GCA_001311865_02715
Unannotated protein.
    
  0.554
GCA_001311865_02695
Unannotated protein.
   
 
 0.530
GCA_001311865_02696
Unannotated protein.
   
 
 0.530
Your Current Organism:
Piscibacillus salipiscarius
NCBI taxonomy Id: 1294022
Other names: P. salipiscarius JCM 13188, Piscibacillus salipiscarius JCM 13188, Piscibacillus salipiscarius RBU1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.