STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311865_03224Unannotated protein. (110 aa)    
Predicted Functional Partners:
GCA_001311865_03222
Unannotated protein.
     0.990
GCA_001311865_03223
Unannotated protein.
     0.989
GCA_001311865_03221
Unannotated protein.
     0.985
GCA_001311865_03219
Unannotated protein.
 
     0.817
GCA_001311865_03218
Unannotated protein.
 
     0.699
GCA_001311865_03217
Unannotated protein.
 
     0.665
GCA_001311865_03912
Unannotated protein.
   
    0.461
GCA_001311865_03771
Unannotated protein.
  
    0.447
GCA_001311865_00479
Unannotated protein.
  
    0.437
GCA_001311865_00480
Unannotated protein.
  
    0.437
Your Current Organism:
Piscibacillus salipiscarius
NCBI taxonomy Id: 1294022
Other names: P. salipiscarius JCM 13188, Piscibacillus salipiscarius JCM 13188, Piscibacillus salipiscarius RBU1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.