STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311865_04649Unannotated protein. (200 aa)    
Predicted Functional Partners:
GCA_001311865_04648
Unannotated protein.
     0.993
GCA_001311865_00177
Unannotated protein.
 
 0.910
GCA_001311865_00175
Unannotated protein.
 0.867
GCA_001311865_04647
Unannotated protein.
 
 
  0.854
GCA_001311865_04651
Unannotated protein.
 
 
 0.850
GCA_001311865_01744
Unannotated protein.
 
 0.844
GCA_001311865_04652
Unannotated protein.
 
 
 0.826
GCA_001311865_01745
Unannotated protein.
 
 0.817
GCA_001311865_00889
Unannotated protein.
  
 
 0.783
GCA_001311865_00176
Unannotated protein.
  
 0.781
Your Current Organism:
Piscibacillus salipiscarius
NCBI taxonomy Id: 1294022
Other names: P. salipiscarius JCM 13188, Piscibacillus salipiscarius JCM 13188, Piscibacillus salipiscarius RBU1-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.