STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001311925_03344Unannotated protein. (363 aa)    
Predicted Functional Partners:
GCA_001311925_01851
Unannotated protein.
   
 0.988
GCA_001311925_00632
Unannotated protein.
  
 0.985
GCA_001311925_03450
Unannotated protein.
  
 0.981
GCA_001311925_03342
Unannotated protein.
  
  
 0.978
GCA_001311925_03343
Unannotated protein.
 
  
 0.972
GCA_001311925_00695
Unannotated protein.
   
 0.970
GCA_001311925_03345
Unannotated protein.
  
  
 0.960
GCA_001311925_01849
Unannotated protein.
   
 0.952
GCA_001311925_01971
Unannotated protein.
 
 
 0.937
GCA_001311925_01296
Unannotated protein.
   
 0.917
Your Current Organism:
Cellulosilyticum ruminicola
NCBI taxonomy Id: 1294025
Other names: C. ruminicola JCM 14822, Cellulosilyticum ruminicola CGMCC 1.5065, Cellulosilyticum ruminicola H1, Cellulosilyticum ruminicola JCM 14822, Clostridium sp. H1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.