STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERK32341.13-hydroxybutyryl-CoA dehydratase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)    
Predicted Functional Partners:
ERK32268.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.999
ERK32311.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
 0.999
ERK32142.1
Acyltransferase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
ERK32076.1
Acyltransferase; COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
ERK30729.1
COG1960 Acyl-CoA dehydrogenases.
 
 0.997
ERK28412.1
Diguanylate cyclase; COG3322 Predicted periplasmic ligand-binding sensor domain.
   
 0.983
ERK29684.1
Diguanylate cyclase/phosphodiesterase; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
   
 0.982
ERK30082.1
Protein DhkJ2; COG2203 FOG: GAF domain.
   
 0.980
ERK32345.1
COG2086 Electron transfer flavoprotein, beta subunit.
  
 0.968
ERK29917.1
Pyruvate-flavodoxin oxidoreductase NifJ; COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
 0.966
Your Current Organism:
Clostridium intestinale
NCBI taxonomy Id: 1294142
Other names: C. intestinale URNW, Clostridium intestinale URNW
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