STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERK28837.1Hypothetical protein; COG1132 ABC-type multidrug transport system, ATPase and permease components. (363 aa)    
Predicted Functional Partners:
ERK32486.1
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
   
 
  0.822
ERK30701.1
Multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase; COG0105 Nucleoside diphosphate kinase; Belongs to the NDK family.
     
 0.664
ERK30998.1
Hypothetical protein; COG1882 Pyruvate-formate lyase.
  
 
  0.609
ERK29598.1
COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
     
 0.584
ERK28817.1
Acetyltransferase; COG2153 Predicted acyltransferase.
       0.543
ERK29563.1
GerABKA family spore germination protein.
  
     0.532
ERK29276.1
GerA spore germination protein.
  
     0.513
ERK30850.1
GerA spore germination protein.
  
     0.508
ERK29781.1
Topology modulation protein; COG0563 Adenylate kinase and related kinases.
  
  
 0.508
ERK30900.1
Hypothetical protein.
  
     0.505
Your Current Organism:
Clostridium intestinale
NCBI taxonomy Id: 1294142
Other names: C. intestinale URNW, Clostridium intestinale URNW
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.