STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001316085_00596Unannotated protein. (128 aa)    
Predicted Functional Partners:
IC006_1458
Unannotated protein.
 
 
 0.983
IC006_1459
Unannotated protein.
  
 
 0.975
IC006_1457
Unannotated protein.
 
     0.885
IC006_1917
Unannotated protein.
 
     0.600
IC006_1456
Unannotated protein.
       0.558
cobD
Unannotated protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
   
 0.404
IC006_2572
Unannotated protein.
 
     0.403
Your Current Organism:
Sulfolobus sp. JCM16833
NCBI taxonomy Id: 1294262
Other names: S. sp. JCM 16833, Sulfolobus sp. DSM 104736, Sulfolobus sp. JCM 16833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.