STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAE90253.1Xylulose kinase. (257 aa)    
Predicted Functional Partners:
GAE90254.1
Xylulose kinase.
     0.994
GAE90255.1
Xylulose kinase.
     0.994
GAE90251.1
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.945
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.944
GAE86852.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.902
GAE87148.1
Malonyl CoA-acyl carrier protein transacylase.
  
 0.843
GAE87617.1
long-chain-fatty-acid-CoA ligase.
  
 
 0.832
GAE88349.1
Fructokinase.
 
 
 0.829
GAE87287.1
Ribose 5-phosphate isomerase B.
    
 0.815
GAE87159.1
Hypothetical protein.
  
  
 0.805
Your Current Organism:
Hungateiclostridium straminisolvens
NCBI taxonomy Id: 1294263
Other names: Clostridium straminisolvens JCM 21531, H. straminisolvens JCM 21531, Hungateiclostridium straminisolvens JCM 21531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.