STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM02496.1Ubiquinone biosynthesis monooxygenase UbiB. (445 aa)    
Predicted Functional Partners:
AHM02497.1
Hypothetical protein.
       0.752
AHM02498.1
Hypothetical protein; FIG00992887.
       0.752
AHM02981.1
Chemotaxis protein methyltransferase CheR.
 
   
 0.612
AHM02500.1
HAD-superfamily hydrolase, subfamily IA, variant 1 family protein.
  
    0.520
AHM02499.1
Trimethylamine methyltransferase family protein; Belongs to the trimethylamine methyltransferase family.
       0.517
AHM03618.1
Hypothetical protein.
   
 
 0.442
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.