STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM02765.1Phosphinothricin N-acetyltransferase, putative. (157 aa)    
Predicted Functional Partners:
AHM02764.1
Hypothetical protein.
  
    0.850
AHM02766.1
DnaJ-like protein DjlA.
       0.702
AHM02767.1
Endonuclease/exonuclease/phosphatase family protein.
       0.680
AHM02768.1
ATPase of the AAA+ class.
       0.663
AHM02762.1
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.537
ureA
Urease gamma subunit; Belongs to the urease gamma subunit family.
  
    0.531
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
    0.512
AHM02761.1
Ser/Thr protein phosphatase family protein.
  
    0.449
AHM02760.1
Permease of the drug/metabolite transporter (DMT) superfamily.
  
    0.437
murJ
Putative peptidoglycan lipid II flippase MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
   
    0.426
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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