STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM03654.1Hypothetical protein. (188 aa)    
Predicted Functional Partners:
AHM03616.1
Putative bacterial hemoglobin; Belongs to the globin family.
  
  
 0.861
AHM03653.1
Rhodanese domain protein, cyanobacterial/alphaproteobacterial subgroup; UPF0176; Belongs to the UPF0176 family.
       0.598
AHM05849.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase.
  
  
 0.551
AHM04699.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
  
 0.542
AHM05803.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1, Vanillate O-demethylase oxidoreductase.
  
  
 0.542
AHM05461.1
Cytochrome B561.
  
     0.522
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
     
  0.499
AHM03328.1
Iron-regulated protein frpC.
     
  0.499
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
  0.499
AHM04168.1
Cytochrome B561.
  
     0.471
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.