AHM04112.1 protein (Roseibacterium elongatum)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

AHM04112.1

pH adaption potassium efflux system protein PhaG. (124 aa)

Predicted Functional Partners:

AHM04117.1

0.998

AHM04113.1

0.995

AHM04114.1

0.994

AHM04115.1

0.994

AHM04116.1

0.994

AHM03011.1

0.983

AHM03009.1

0.943

AHM03006.1

0.931

AHM03010.1

0.929

AHM03007.1

0.927

Your Current Organism:

Roseibacterium elongatum

NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AHM03006.1	AHM03007.1	roselon_00566	roselon_00567	Na(+) H(+) antiporter subunit F.	Na(+) H(+) antiporter subunit E.	0.995
AHM03006.1	AHM03009.1	roselon_00566	roselon_00569	Na(+) H(+) antiporter subunit F.	Na(+) H(+) antiporter subunit C.	0.996
AHM03006.1	AHM03010.1	roselon_00566	roselon_00570	Na(+) H(+) antiporter subunit F.	Na(+) H(+) antiporter subunit B.	0.990
AHM03006.1	AHM03011.1	roselon_00566	roselon_00571	Na(+) H(+) antiporter subunit F.	Na(+) H(+) antiporter subunit A.	0.997
AHM03006.1	AHM04112.1	roselon_00566	roselon_01746	Na(+) H(+) antiporter subunit F.	pH adaption potassium efflux system protein PhaG.	0.931
AHM03006.1	AHM04114.1	roselon_00566	roselon_01748	Na(+) H(+) antiporter subunit F.	Na(+) H(+) antiporter subunit E.	0.939
AHM03006.1	AHM04115.1	roselon_00566	roselon_01749	Na(+) H(+) antiporter subunit F.	Na(+) H(+) antiporter subunit D.	0.956
AHM03006.1	AHM04116.1	roselon_00566	roselon_01750	Na(+) H(+) antiporter subunit F.	Na(+) H(+) antiporter subunit C.	0.966
AHM03006.1	AHM04117.1	roselon_00566	roselon_01751	Na(+) H(+) antiporter subunit F.	pH adaptation potassium efflux system a.	0.961
AHM03007.1	AHM03006.1	roselon_00567	roselon_00566	Na(+) H(+) antiporter subunit E.	Na(+) H(+) antiporter subunit F.	0.995
AHM03007.1	AHM03009.1	roselon_00567	roselon_00569	Na(+) H(+) antiporter subunit E.	Na(+) H(+) antiporter subunit C.	0.997
AHM03007.1	AHM03010.1	roselon_00567	roselon_00570	Na(+) H(+) antiporter subunit E.	Na(+) H(+) antiporter subunit B.	0.992
AHM03007.1	AHM03011.1	roselon_00567	roselon_00571	Na(+) H(+) antiporter subunit E.	Na(+) H(+) antiporter subunit A.	0.999
AHM03007.1	AHM04112.1	roselon_00567	roselon_01746	Na(+) H(+) antiporter subunit E.	pH adaption potassium efflux system protein PhaG.	0.927
AHM03007.1	AHM04113.1	roselon_00567	roselon_01747	Na(+) H(+) antiporter subunit E.	Na(+) H(+) antiporter subunit F.	0.917
AHM03007.1	AHM04115.1	roselon_00567	roselon_01749	Na(+) H(+) antiporter subunit E.	Na(+) H(+) antiporter subunit D.	0.957
AHM03007.1	AHM04116.1	roselon_00567	roselon_01750	Na(+) H(+) antiporter subunit E.	Na(+) H(+) antiporter subunit C.	0.985
AHM03007.1	AHM04117.1	roselon_00567	roselon_01751	Na(+) H(+) antiporter subunit E.	pH adaptation potassium efflux system a.	0.988
AHM03009.1	AHM03006.1	roselon_00569	roselon_00566	Na(+) H(+) antiporter subunit C.	Na(+) H(+) antiporter subunit F.	0.996
AHM03009.1	AHM03007.1	roselon_00569	roselon_00567	Na(+) H(+) antiporter subunit C.	Na(+) H(+) antiporter subunit E.	0.997

page 1 of 6

Network Stats

number of nodes:

11

number of edges:

46

average node degree:

8.36

avg. local clustering coefficient:

0.925

expected number of edges:

18

PPI enrichment p-value:

1.71e-08

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009168

Purine ribonucleoside monophosphate biosynthetic process

5 of 8

2.1

2.84

1.35e-06

GO:0006177

GMP biosynthetic process

3 of 3

2.3

2.09

0.00010

GO:0006166

Purine ribonucleoside salvage

3 of 3

2.3

2.09

0.00010

GO:0106380

Purine ribonucleotide salvage

3 of 4

2.17

2.02

0.00012

GO:0009152

Purine ribonucleotide biosynthetic process

5 of 32

1.49

1.7

3.32e-05

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0106130

Purine phosphoribosyltransferase activity

3 of 4

2.17

1.44

0.0018

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:767

Purine nucleoside monophosphate metabolic process, and Ribonucleoside hydrolase-like

9 of 18

2.0

5.19

3.83e-14

CL:769

Mixed, incl. GMP metabolic process, and Asp/Glu racemase

7 of 11

2.1

4.64

2.61e-11

CL:771

GMP biosynthesis, and Asp/Glu racemase

5 of 5

2.3

3.85

1.67e-08

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00230

Purine metabolism

8 of 69

1.36

2.05

2.32e-08

map00471

D-Glutamine and D-glutamate metabolism

2 of 3

2.12

1.13

0.0074

map01100

Metabolic pathways

11 of 793

0.44

0.37

0.00072

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-168249

Innate Immune System

3 of 15

1.6

1.27

0.0016

MAP-168256

Immune System

3 of 20

1.48

1.19

0.0017

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0660

Purine salvage

3 of 3

2.3

1.85

0.00031

KW-0332

GMP biosynthesis

2 of 2

2.3

1.14

0.0077

KW-0328

Glycosyltransferase

3 of 13

1.66

1.13

0.0043

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00156

Phosphoribosyl transferase domain

3 of 6

2.0

1.31

0.0029

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR029057

Phosphoribosyltransferase-like

4 of 10

1.9

1.69

0.00034

IPR000836

Phosphoribosyltransferase domain

4 of 10

1.9

1.69

0.00034

IPR015875

IMP dehydrogenase / GMP reductase, conserved site

2 of 2

2.3

0.72

0.0473

IPR001093

IMP dehydrogenase/GMP reductase

2 of 2

2.3

0.72

0.0473

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