STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM04381.1Hippurate hydrolase. (389 aa)    
Predicted Functional Partners:
AHM04380.1
Amidohydrolase family protein.
 
    
0.749
AHM04379.1
Acetylornithine deacetylase.
     
 0.732
AHM04378.1
Dipeptide transport ATP-binding protein DppD; TC 3.A.1.5.2; Belongs to the ABC transporter superfamily.
  
    0.729
AHM04382.1
Hippurate hydrolase.
 
    
0.658
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.
  
  
 0.449
AHM04377.1
Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein.
   
   0.430
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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