STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM05407.1Lytic transglycosylase, catalytic. (175 aa)    
Predicted Functional Partners:
AHM03703.1
Flagellum-specific ATP synthase FliI.
 
  
 0.618
AHM05408.1
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
    0.614
AHM04300.1
Flagellar motor rotation protein MotB.
 
  
 0.540
AHM03722.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
    0.490
AHM03706.1
Flagellar hook-basal body complex protein FliE, putative.
  
  
 0.487
AHM05556.1
Flagellar motor switch protein FliG.
 
    0.444
AHM03730.1
Flagellar hook protein FlgE.
  
  
 0.437
AHM05632.1
Flagellar motor switch protein.
  
    0.433
fliP
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.404
AHM03378.1
OmpA/MotB.
  
     0.403
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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