STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM05657.1ABC-type transport system; Involved in resistance to organic solvents, periplasmic component. (152 aa)    
Predicted Functional Partners:
AHM04819.1
Histidine ABC transporter, ATP-binding protein HisP; TC 3.A.1.3.1.
 
 0.994
AHM04820.1
ABC-type transport system; Involved in resistance to organic solvents, permease component.
 
 0.994
AHM02783.1
ABC-type transport system; Involved in resistance to organic solvents, permease component USSDB6A.
  
 0.992
AHM03790.1
ABC-type transport system; Involved in resistance to organic solvents, auxiliary component.
 
 0.987
AHM05656.1
Hypothetical protein; FIG167255.
       0.847
AHM03791.1
Lipoprotein VacJ.
 
   
 0.840
AHM03242.1
Anti-sigma F factor antagonist (spoIIAA-2), Anti-sigma B factor antagonist RsbV; Belongs to the anti-sigma-factor antagonist family.
  
   0.823
AHM05658.1
NADH:ubiquinone oxidoreductase 17.2 kD subunit.
     
 0.737
AHM03731.1
Flagellar motor rotation protein MotB.
 
 
   0.651
AHM04300.1
Flagellar motor rotation protein MotB.
   
   0.606
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.