STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHM05894.1Fructose-1,6-bisphosphatase, GlpX type. (321 aa)    
Predicted Functional Partners:
AHM04807.1
Transketolase; Belongs to the transketolase family.
   
 0.967
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
    
 0.944
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.926
AHM04798.1
Fructose-bisphosphate aldolase class I.
    
 0.917
AHM03751.1
Mannose-1-phosphate guanylyltransferase (GDP).
     
 0.905
AHM05610.1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
    
 0.905
AHM05286.1
Tagatose-6-phosphate kinase / 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
     
 0.903
AHM05892.1
Homoserine dehydrogenase.
  
    0.669
AHM05895.1
Single-stranded-DNA-specific exonuclease RecJ.
       0.634
leuS
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
    0.626
Your Current Organism:
Roseibacterium elongatum
NCBI taxonomy Id: 1294273
Other names: R. elongatum DSM 19469, Roseibacterium elongatum DSM 19469
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