STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sbnASiderophore biosynthesis protein SbnA; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)    
Predicted Functional Partners:
sbnI
Siderophore biosynthesis protein SbnI; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.991
sbnB
Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.988
sbnF
Siderophore biosynthesis protein SbnF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.913
sbnC
Siderophore biosynthesis protein SbnC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.912
sbnH
Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 0.907
cysS
cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.897
sbnE
Siderophore biosynthesis protein SbnE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.893
sbnD
Siderophore biosynthesis protein SbnD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.892
sbnG
Siderophore biosynthesis protein SbnG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.863
cysE
Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.820
Your Current Organism:
Staphylococcus schleiferi
NCBI taxonomy Id: 1295
Other names: ATCC 43808, CCUG 25351, CIP 103643, DSM 4807, LMG 13347, LMG:13347, NCTC 12218, NRRL B-14775, S. schleiferi, strain N850274
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.