Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sbnBOrnithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
sbnA
Siderophore biosynthesis protein SbnA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.969
sbnE
Siderophore biosynthesis protein SbnE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.949
sbnC
Siderophore biosynthesis protein SbnC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.914
sbnF
Siderophore biosynthesis protein SbnF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.914
sbnH
Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
 
 0.824
sbnG
Siderophore biosynthesis protein SbnG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
 
    0.784
sbnD
Siderophore biosynthesis protein SbnD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.741
sbnI
Siderophore biosynthesis protein SbnI; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.730
AKS73802.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.612
ilvB
Acetolactate synthase catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.569
Your Current Organism:
Staphylococcus schleiferi
NCBI taxonomy Id: 1295
Other names: ATCC 43808, CCUG 25351, CIP 103643, DSM 4807, LMG 13347, LMG:13347, NCTC 12218, NRRL B-14775, S. schleiferi, strain N850274
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