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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS73627.1Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
AKS73628.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.863
AKS73629.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.795
AKS73630.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.788
AKS74602.1
Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.783
AKS72603.1
Ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
braB
Branched-chain amino acid ABC transporter substrate-binding protein; Component of the transport system for branched-chain amino acids.
       0.719
AKS73626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.600
odhB
Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
  
   0.518
sucA
2-oxoglutarate dehydrogenase; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).
     
 0.476
AKS74217.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.434
Your Current Organism:
Staphylococcus schleiferi
NCBI taxonomy Id: 1295
Other names: ATCC 43808, CCUG 25351, CIP 103643, DSM 4807, LMG 13347, LMG:13347, NCTC 12218, NRRL B-14775, S. schleiferi, strain N850274
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