Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKS73695.1Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)    
Predicted Functional Partners:
AKS73696.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.873
AKS73694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.801
AKS74154.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.573
AKS73698.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
AKS73697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.461
AKS73693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.456
AKS73690.1
HK97 gp10 family phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.447
Your Current Organism:
Staphylococcus schleiferi
NCBI taxonomy Id: 1295
Other names: ATCC 43808, CCUG 25351, CIP 103643, DSM 4807, LMG 13347, LMG:13347, NCTC 12218, NRRL B-14775, S. schleiferi, strain N850274
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